{
  "_id": "6aabbe483d719c1f8406e1bf",
  "Package": "DrImpute",
  "Version": "1.0",
  "Date": "2017-7-15",
  "Title": "Imputing Dropout Events in Single-Cell RNA-Sequencing Data",
  "Description": "R codes for imputing dropout events. Many statistical\nmethods in cell type identification, visualization and lineage\nreconstruction do not account for dropout events ('PCAreduce',\n'SC3', 'PCA', 't-SNE', 'Monocle', 'TSCAN', etc). 'DrImpute' can\nimprove the performance of such software by imputing dropout\nevents.",
  "Author": "Il-Youp Kwak with contributions from Wuming Gong",
  "Maintainer": "Il-Youp Kwak <ilyoup.kwak@gmail.com>",
  "License": "GPL-3",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/ikwak2/DrImpute",
  "RoxygenNote": "6.0.1",
  "Repository": "https://ikwak2.r-universe.dev",
  "Date/Publication": "2017-09-09 09:20:30 UTC",
  "RemoteUrl": "https://github.com/ikwak2/drimpute",
  "RemoteRef": "HEAD",
  "RemoteSha": "f7f882b36ab774ff87509696788cb025033f61fc",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-09-17 09:31:43 UTC",
    "User": "root"
  },
  "_user": "ikwak2",
  "_type": "src",
  "_file": "DrImpute_1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/ad792ab004468f81d8b2aca913ae5722dbcbc503b7a0155a9bbaee1775332e45",
  "_filesize": 1519765,
  "_sha256": "ad792ab004468f81d8b2aca913ae5722dbcbc503b7a0155a9bbaee1775332e45",
  "_expires": "2026-12-26T10:17:42.000Z",
  "_created": "2026-09-17T09:31:43.000Z",
  "_published": "2026-09-17T10:17:44.664Z",
  "_jobs": [
    {
      "job": 105150615093,
      "time": 178,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10489778020"
    },
    {
      "job": 105150615106,
      "time": 156,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10489378068"
    },
    {
      "job": 105150615217,
      "time": 127,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10490221075"
    },
    {
      "job": 105150615079,
      "time": 161,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10490091667"
    },
    {
      "job": 105150615119,
      "time": 118,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10491432854"
    },
    {
      "job": 105150615113,
      "time": 229,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10489707528"
    },
    {
      "job": 105150615229,
      "time": 127,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10491239011"
    },
    {
      "job": 105150615178,
      "time": 298,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10489848155"
    },
    {
      "job": 105149374709,
      "time": 245,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10489911887"
    },
    {
      "job": 105150615045,
      "time": 131,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10489842546"
    },
    {
      "job": 105150615171,
      "time": 332,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10489153744"
    },
    {
      "job": 105150615250,
      "time": 185,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10489733540"
    },
    {
      "job": 105150615216,
      "time": 105,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10490330472"
    },
    {
      "job": 105150615129,
      "time": 343,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10489328608"
    },
    {
      "job": 105150615152,
      "time": 95,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10489243149"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284",
  "_status": "success",
  "_upstream": "https://github.com/ikwak2/drimpute",
  "_commit": {
    "id": "f7f882b36ab774ff87509696788cb025033f61fc",
    "author": "ilyoup kwak <ikwak@umn.edu>",
    "committer": "ilyoup kwak <ikwak@umn.edu>",
    "message": "readme update\n",
    "time": 1504948830
  },
  "_maintainer": {
    "name": "Il-Youp Kwak",
    "email": "ilyoup.kwak@gmail.com",
    "login": "ikwak2",
    "description": "",
    "uuid": 944558
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.1.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "devtools",
      "role": "Suggests"
    },
    {
      "package": "roxygen2",
      "role": "Suggests"
    },
    {
      "package": "irlba",
      "role": "Suggests"
    }
  ],
  "_owner": "ikwak2",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [],
  "_tags": [],
  "_stars": 5,
  "_contributors": [
    {
      "user": "ikwak2",
      "count": 22,
      "uuid": 944558
    }
  ],
  "_userbio": {
    "uuid": 944558,
    "type": "user",
    "name": "Il-Youp Kwak",
    "followers": 63
  },
  "_downloads": {
    "count": 407,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/DrImpute"
  },
  "_mentions": 19,
  "_devurl": "https://github.com/ikwak2/drimpute",
  "_searchresults": 89,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/DrImpute.html",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/ikwak2/drimpute",
  "_realowner": "ikwak2",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2017-07-15"
    }
  ],
  "_exports": [
    "DrImpute",
    "getCls",
    "preprocessSC"
  ],
  "_datasets": [
    {
      "name": "exdata",
      "title": "Usoskin data",
      "object": "exdata",
      "file": "exdata.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "NF",
        "NP",
        "TH",
        "TH",
        "NP",
        "NP",
        "NP",
        "TH",
        "TH",
        "TH",
        "PEP",
        "NF",
        "NP",
        "NP",
        "NP",
        "TH",
        "NF",
        "PEP",
        "TH",
        "TH",
        "PEP",
        "TH",
        "NF",
        "NP",
        "TH",
        "TH",
        "TH",
        "TH",
        "TH",
        "NP",
        "NF",
        "NP",
        "TH",
        "TH",
        "TH",
        "TH",
        "NP",
        "NP",
        "NF",
        "PEP",
        "TH",
        "NP",
        "TH",
        "NP",
        "TH",
        "PEP",
        "TH",
        "TH",
        "NP",
        "TH",
        "NP",
        "TH",
        "TH",
        "TH",
        "TH",
        "TH",
        "NF",
        "NP",
        "NF",
        "NF",
        "NF",
        "NP",
        "PEP",
        "TH",
        "TH",
        "PEP",
        "PEP",
        "NP",
        "TH",
        "NP",
        "NP",
        "PEP",
        "NP",
        "TH",
        "PEP",
        "PEP",
        "TH",
        "NF",
        "NP",
        "NF",
        "PEP",
        "NP",
        "NF",
        "NP",
        "NF",
        "TH",
        "TH",
        "TH",
        "NF",
        "NP",
        "NF",
        "TH",
        "NF",
        "TH",
        "TH",
        "TH",
        "NF",
        "NP",
        "NP",
        "NP",
        "NP",
        "PEP",
        "NP",
        "PEP",
        "NF",
        "NP",
        "TH",
        "NP",
        "TH",
        "TH",
        "TH",
        "NF",
        "TH",
        "TH",
        "TH",
        "PEP",
        "TH",
        "NP",
        "PEP",
        "TH",
        "TH",
        "NP",
        "TH",
        "NP",
        "NP",
        "NF",
        "NP",
        "NP",
        "TH",
        "NP",
        "NP",
        "NF",
        "TH",
        "TH",
        "NF",
        "TH",
        "PEP",
        "TH",
        "NP",
        "TH",
        "PEP",
        "TH",
        "TH",
        "TH",
        "PEP",
        "PEP",
        "TH",
        "TH",
        "PEP",
        "NF"
      ],
      "rows": 25334,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "DrImpute",
      "title": "Imputing dropout events in single-cell RNA-sequencing data.",
      "topics": [
        "DrImpute"
      ]
    },
    {
      "page": "exdata",
      "title": "Usoskin data",
      "topics": [
        "exdata"
      ]
    },
    {
      "page": "getCls",
      "title": "get base clustering results using SC3 based clustering methods.",
      "topics": [
        "getCls"
      ]
    },
    {
      "page": "preprocessSC",
      "title": "A function for preprocessing gene expression matrix.",
      "topics": [
        "preprocessSC"
      ]
    }
  ],
  "_readme": "https://github.com/ikwak2/drimpute/raw/HEAD/README.md",
  "_rundeps": [
    "Rcpp",
    "RcppArmadillo"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "DrImpute.Rmd",
      "filename": "DrImpute.html",
      "title": "DrImpute : imputing dropout events in single-cell RNA-sequencing data",
      "author": "Il-Youp Kwak",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Data preparation",
        "Data analysis"
      ],
      "created": "2017-07-15 08:42:29",
      "modified": "2017-07-15 09:12:30",
      "commits": 2
    }
  ],
  "_score": 6.824451270036613,
  "_indexed": true,
  "_nocasepkg": "drimpute",
  "_universes": [
    "ikwak2"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-17T09:34:42.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/1e6f85866e029a0cb90f95e76f532c2d65c64312dba5286f2e72f3170fd1f14d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-17T09:34:18.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/e9bb9a86e37418b00e4c40c2f5b15bfc94cc1070de5349aba29c6662cc81e5fe",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-17T09:33:53.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/a8f16f55436ada9f06794c89c0db3ff6da59595af2dac23ab6411b330cd3c15a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-17T09:34:21.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/649dc33462d13fde255ed1478714f5d3d75b3ba968bacdd711a97fb7eae267e5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-17T10:14:22.000Z",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/376afc90e68ff7240378ac6c3b675e500151d6488cc6dea232e8baf4635f086f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-17T09:35:38.000Z",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/f21eaab78a5decddcdeb88f4f7cbe9f13056d5027189be1349b2f10ab2fab592",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-17T10:17:02.000Z",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/259ff9ed55dc2c984cdfa71797eaf673ff3ac0c0ff8aa0e8d0bc4d9c1c486966",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-17T09:36:50.000Z",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/1c80187d81eba4f2c9a12688ef72d65311a7912b5bc70fb7d6bfc36dc1c5d292",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0",
      "date": "2026-09-17T09:34:08.000Z",
      "arch": "emscripten",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/d15a562873c8a650c1c271a53f72374301412668627f476d9066fff9bd0f3a32",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-17T09:36:26.000Z",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/313e9de4f0b101edc8e61fbf572bc6330d3850e37a617a73b49761a63b5a6ac2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-17T09:33:32.000Z",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/1c948a6da7c1e396cae2eea0b42efbab18938d128f0c65614c7ff7635dcfe648",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-17T09:32:59.000Z",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/59692f66b9f44fed4487a12b5f5ed1e457b44fb7a5c5b98ae236d78840fcd128",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-17T09:36:51.000Z",
      "arch": "aarch64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/548eb6edb4838a072e6e832f5914ac6cb2cc44d79ff7337ed30fbbafe1e02cfc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-17T09:32:54.000Z",
      "arch": "x86_64",
      "commit": "f7f882b36ab774ff87509696788cb025033f61fc",
      "fileid": "https://r2.ropensci.org/d847e34f9e08b7679c3a731950008cfdf648ee38489330684a03dc8b07c14ca6",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ikwak2/actions/runs/35205223284"
    }
  ]
}