Package: DrImpute 1.0

DrImpute: Imputing Dropout Events in Single-Cell RNA-Sequencing Data

R codes for imputing dropout events. Many statistical methods in cell type identification, visualization and lineage reconstruction do not account for dropout events ('PCAreduce', 'SC3', 'PCA', 't-SNE', 'Monocle', 'TSCAN', etc). 'DrImpute' can improve the performance of such software by imputing dropout events.

Authors:Il-Youp Kwak with contributions from Wuming Gong

DrImpute_1.0.tar.gz
DrImpute_1.0.zip(r-4.7)DrImpute_1.0.zip(r-4.6)DrImpute_1.0.zip(r-4.5)
DrImpute_1.0.tgz(r-4.6-x86_64)DrImpute_1.0.tgz(r-4.6-arm64)DrImpute_1.0.tgz(r-4.5-x86_64)DrImpute_1.0.tgz(r-4.5-arm64)
DrImpute_1.0.tar.gz(r-4.7-arm64)DrImpute_1.0.tar.gz(r-4.7-x86_64)DrImpute_1.0.tar.gz(r-4.6-arm64)DrImpute_1.0.tar.gz(r-4.6-x86_64)
DrImpute_1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
DrImpute/json (API)

# Install 'DrImpute' in R:
install.packages('DrImpute', repos = c('https://ikwak2.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ikwak2/drimpute/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

6.73 score 4 stars 1 packages 89 scripts 288 downloads 19 mentions 3 exports 2 dependencies

Last updated from:f7f882b36a. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK145
linux-devel-x86_64OK191
source / vignettesOK209
linux-release-arm64OK160
linux-release-x86_64OK148
macos-release-arm64OK173
macos-release-x86_64OK208
macos-oldrel-arm64OK149
macos-oldrel-x86_64OK398
windows-develOK112
windows-releaseOK168
windows-oldrelOK109
wasm-releaseOK126

Exports:DrImputegetClspreprocessSC

Dependencies:RcppRcppArmadillo

DrImpute : imputing dropout events in single-cell RNA-sequencing data

Il-Youp Kwak

Rendered fromDrImpute.Rmdusingknitr::rmarkdownon Jun 01 2026.

Last update: 2017-07-15
Started: 2017-07-15